COMRAD - comparative radiation hybrid mapping
 
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Markers

BTA 4

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
F3
AGLA227
TTAGAGCATAGTTGATTTAAAATGC
CACAGGAAACTCTACTCAATATTC
0.138
 
 
BL1024
CACTCGGAATTCTCCAGAGC
TTGATGTCTCAGTCAATCTCCC
0.128
 
 
BL1030
TTGATGGATGAATGGGTAAAG
ATCTTGCTTCCATACCATGC
0.143
 
F3
BL1121
CCAGGCTAGGAAGGCAGTAG
AGGGTACAAAAATCCCACACC
0.191
 
 
BM1224
AGGAACCACATTGGGTAGTCC
TCCCTCTCTCCCTGAGGC
0.187
 
 
BM1260
AAGTACATGCATGCTGCTGC
TCCTAAGTTCCATCAACAGGTG
0.326
 
F2
BM6315
CCTGAATGAATATGTGTGAGCA
CTTGCCAGTGATGTCATGCT
0.106
 
 
BM6437
GAGGAAATACAGAACTCAGCCG
TCAAACAGCATCTAGGCGG
0.17
 
 
BM6458
AAATTTAACCCTTTGGAAAAGC
AGTGTGGGGTAGAGCACTGG
0.174
 
 
BMC1410
AAGGCTAAAGGATGCAGGAG
CACATTGCTCAGCATCCATC
0.223
 
 
BMS1074
CAGTAGCCAAGATATGGAAGCA
AGCTCCTTGCTGCTACAAATG
0.128
 
 
BMS1237
GTTTTCACTAGCACCCTGTGG
CCCAGTTAACCCTAGAGTCGG
0.213
 
 
BMS1634
CAATAGTCTTCACAGTCCTCCC
GCAAAGAATTGAACATGACTGA
0.196
 
 
BMS1788
ACGTCCAGATTCAGATTTCTTG
GGAGAGGAATCTTGCAAAGG
0.16
 
 
BMS1840
TTTCAGCTGTTCACTTAGCTGC
AAATCCACCCGAAGTATGAGG
0.255
 
 
BMS1878
GAAATTGCCCAAGACTGAATG
TTACTACACCAGCTTTTGTGCC
0.215
 
F2
BMS2571
CCCCAGTGATGTTCACACAG
CAGCTGTCCAGCATCTGAAG
0.181
 
 
BMS2646
CAAAGCCATAAGAAGCAATTATG
CCTTCTATAGTGTGGTGACTACCC
0.213
 
F2
BMS2809
ATTTGCTGCCCTTGTGTTG
TCAAAAGTCCCTGCTAGAATCC
0.237
 
 
BMS3002
TTGAAATTGGCCAGGTGAC
GTCAAGGCTGTCAAGGCC
0.17
 
F1
BMS495
CTTTCACAACCGAAAGACAATC
TCACACCCCTTCCTCTCTTC
0.141
 
 
BMS648
ACTTCCCATCCATCCATCAG
CTTCCATTCTCAGCCATCTAGC
0.151
 
F2
BMS779
TCTTGTGGGGGAACCTCTA
TGCTTGGAAGTATACATGATGG
0.172
 
 
BMS789
TGCAAGCTAGTCCTTTCTGATG
GCAAGCAAGCTCCACTAACC
0.211
 
F2
BMS8233
GCATTGGCAAGTGGATTCTT
AAGGCAATTAACACATACATCACC
0.223
 
 
BMS827
GGACCAACTGCACAAATTCT
AAGTGAAATTACTAGTGGGGTGTG
0.17
 
F1
BMS885
AATATGTGTTCCATGCCAAATG
TTCAGCATTAGTCCTTCCAATG
0.226
 
F3
BR6303
TGAGCCATAGAATTAAGATTCAAGC
TTTGTTCCTCTTTATTTTCTTCTGC
0.133
 
 
CSSM14
AAATGACCTCTCAATGGAAGCTTG
AATTCTGGCACTTAATAGGATTCA
0.198
 
 
DIK026
TGCTGAGTGTGATTCCTGAG
AAATAACCTTGAGACTACGGTA
0.187
 
 
DIK063
AGACAGACCATTGGCAAAGGG
CTACAGTCCACAGGGCTGCA
0.109
 
F2
HEL25
TCATCAGCCAGAGATAGTGC
AGGCTACAGTCCATGGGATT
0.118
 
F1
HUJ673
GCAAGTGCTCCACAAAGCCT
GCCTTTTGGTGACAGAGTTGC
0.181
 
 
IDVGA51
ATGGCAATATTTTGTTCTTTTTC
ATTCCTTGATGGTCTAATGGTTA
0.174
 
F2
INRA072
CTTAACTCATTCACCTCAACTG
AGTGATTGAGCACATTGCGCAT
0.086
 
 
LEP*
GATGCAGCAGACCAAGTGG
CCCATTGCTAGAACCCAGG
0.16
leptin
F1
MAF50
GTAGACTACTCATGAAAATCAGGTCTTAGG
GGGACATGCAGCTATACACTTGAG
0.149
 
F1
MAF70
CACGGAGTCACAAAGAGTCAGACC
GCAGGACTCTACGGGGCCTTTGC
0.176
 
 
McM218
CACTAAAAGCTTATGAAAGTTCCAGC
GATCCTAGCATCAGTCTCCAGATG
0.16
 
 
MGTGB4
GAGCAGCTTCTTTCTTTCTCATCTT
GCTCTTGGAAGCTTATTGTATAAAG
0.183
 
 
OarCP26
GGCCTAACAGAATTCAGATGATGTTGC
GTCACCATACTGACGGCTGGTTCC
0.207
 
 
RM067
AGGGACCCTGGAGTATTTGG
GTGGAAAGCTGCCCTATCTG
0.194
 
 
RM088
GATCCTCTTCTGGGAAAAGAGAC
CCTGTTGAAGTGAACCTTCAGAA
0.191
 
 
RM188
GGGTTCACAAAGAGCTGGAC
GCACTATTGGGCTGGTGATT
0.17
 
F1
TGLA116
GCACAGTAATAAGAGTGATGGCAGA
TGGAGAAGATTTGGCTGTGTACCCA
0.234
 
 
TGLA159
GCATCCAGGGAACAAATTACAAAC
TTTATTTCGAATCTCTTGAGTACAG
0.185
 
F2
TGLA215
GCTAGGTGATGCACTTTATACACTT
CATACATAACTGAGTGACTTAGCAT
0.152
 
Not included in map
 
INRA37
GATCCTGCTTATATTTAACCAC
AAAATTCCATGGAGAGAGAAAC
0.181
 

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© Roslin Institute 2002

Dr John Williams
0131 527 4200