COMRAD - comparative radiation hybrid mapping
 
introduction
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Roslin Institute

 

Markers

BTA 3

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
F3
ACADM*
GAGCAGGCTCTGATGTAG
CTCCATTGGTTATCCAC
0.223
acyl-coenzyme A dehydrogenase
BL41
CCTCTGCCATCTTTATTCCG
AAGATCAACTTATTCCTCACAGTGG
0.16
BM220
TTTTCTACTGCCCAACAAAGTG
TAGGTACCATAGCCTAGCCAAG
0.17
BM2924
GATGGAGGCTGGAGAAATTG
TCTAATGGGTGGGACTCCG
0.191
BM3020
TATATAAAAGGCCCTGATTCCA
GATCTGGAGCAGTCTGGCTA
0.181
F3
BM4129
AACCTTTATTAGGGGAGTTCGG
TAAGCTGTGGAGTGCAGCAA
0.16
F2
BM723
ACCCTTGGTTTTCTGCTGG
CATCCTGTGTGAGTGTTGTGG
0.117
BMC4214
CTAGATTGTTTTCTATGAACAGGGG
GCATTTCCAGACCTTTCCTG
0.266
F4
BMC5227
TGTGCGCTGTACAGTGAGTG
ATGTCAAGGTCAGGGAGGAA
0.213
BMS2075
TCCCATTCCTGAGCTGATG
AGTCATTTCCCCTCTTTGGG
0.16
BMS2095
TAACATTCCCAAGATGGTTGTG
TCAAGTTTTGCACATTGTATGC
0.17
BMS2145
GCAAATAACCTCCATATTGCTG
ATGGAAGTGGCTTAAGTGTCC
0.17
F1
BMS2522
AGGCAGGTGTTTTGGTTCTG
AGGCCATGTAGAGGTAAAGTGC
0.245
F4
BMS2712
GGTGCACTTGTTTCAACCAC
CCAGGAATATTTGGTCACCG
0.266
BMS2891
ATCTTGTTGAAATGCTCTGAGG
GCTTTCTCTACCATAAAGCGTG
0.128
BMS2904
TGGCAGTGAGAGAGGGGAC
TCCACTTGAGAGCGTGTCTG
0.213
F3
BMS694
AAACTCTAGGTCCATCCAGGTT
AGATGTGGAAGTGTCCATCAA
0.181
BMS819
AAAGAATTGGACCTGACTGAGC
GCTTTCACTTCTGCTGGCTT
0.245
F3
BMS835
TCATGTGCATGGGGTTTG
ATCTGCCTACCTGGGCATC
0.085
BMS871
GAACATGAGGTTGACAAAGGA
TCCAGTGACTCTTTTCTGCC
0.277
F2
CSSM054
AAACACATGGAGAATCAGACCTCC
TTCCAACAACCGTAGCACCTCCTG
0.215
CYM*
CCAGGGCTTCTGTACCAGTGGCTTC
TGAGAATCATCTGTCTGGAAACCTC
0.16
prochymosin
HUJ246
ACTCCAGTTTTCTTTCCTGGG
TGCCATGTAGTAGCTGTGTGC
0.16
HUJII77
TCCATCAAGTATTTGAGTGCAA
ATAGCCCTACCCACTGTTTCTG
0.223
IDVGA53
ACGGGACGCCTCGGTCAGTG
GAAGGGGAAGGGGAAGATGAAC
0.223
F3
ILSTS029
TGTTTTGATGGAACACAGCC
TGGATTTAGACCAGGGTTGG
0.117
ILSTS044
AGTCACCCAAAAGTAACTGG
ACATGTTGTATTCCAAGTGC
0.138
ILSTS064
TTGGGTTGCCAAATTGCTCC
CTAGAGGATCTATCCACAGC
0.117
ILSTS096
GTGACCTGGAGAAGTTTTCC
ACCACGCTCTGACTTGTAGC
0.277
F3
INRA003
CTGGAGGTGTGTGAGCCCCATTTA
CTAAGAGTCGAAGGTGTGACTAGG
0.17
INRA200
GACTGAGCGACTGAACTGAGG
TCTTCAGCTGCAAAGTAGAG
0.106
MCM58
CTGGGTCTGTATAAGCACGTCTCC
CAGAACAATAAACGCTAAACCAGAGC
0.17
F2
RM003
ACTGACATTTTTGTGAGACTC
AAATTAGAAAATGCAGTGCC
0.138
F1
RM019
CCAGGGTGCTGATATCTGGAGG
TTCAATGAACAAGATGGAGACTT
0.245
F1
RM065
CTTTGTAACTAACTCTACTGCAG
TCTGACTCCCCCTCCCTGCAAG
0.234
F4
RM309
TGCTACTCGCACACAGTGG
ACCTGAAGCAGGGAAGGG
0.223
Not included in map
BL1048
ACCGCCACAAGGGAAATC
AAGGCAACAGCATATGAAACTG
0.191
BMS2790
AAGACAAGGACTTTCAGCCC
AAAGAGTCGGACATTACTGAGC
0.234
BMS2833
ACCAGATGACCAGACCTTGTG
TGATCTGTGGATCCTCCCTC
0.223
BR4502
AGCCCACTCCAATATTCTTGC
AGAATCTCGGCAGGCTTTTC
0.213

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© Roslin Institute 2002

Dr John Williams
0131 527 4200