COMRAD - comparative radiation hybrid mapping
 
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Markers

BTA 29

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
F2
ABS14
CTCAGTCCTTTTTGTGGCTG
GAAGCAGGGCAGTTACCTTG
0.33
 
 
ARO26
CATTGAGAATATGAACATTTGGGC
CAGTGGTCATGAATGCCCTGC
0.283
 
F1
BM4602
GTGCATTCACACATCTCCATG
GCAGCTTTAGCATCTGGGTC
0.426
 
F2
BMC1206
GGGTGGCTATGACTCCAGTG
GGTCCAGCCTTCCACCAC
0.234
 
 
BMC2228
GGCATGGCATAACCATATAGC
ATGGTGGTGTCAGATTGGC
0.333
 
 
BMC3224
CCATCACTGCTATTCTACCTCC
CACAGCCAATTTCTGATTTCAG
0.204
 
 
BMC6004
GATTCCCTGATAGAAATGGCA
GGTGAGATGAGGATGCGATC
0.234
 
F1
BMC8012
AATTCCATGCACAGAGGACC
GATTCCAGAAAGTTCCCCCA
0.277
 
F2
BMCR17A
GGCTGGGAGGGTAGACATC
CACCACCAACCCACGAAG
0.261
 
 
BMS1244
TAATACAGGCATTTGAGGGG
CAAACTCTCTTCCCTACACATACA
0.372
 
F1
BMS1600
TGTGGGAATCTGAAGCTCTATAT
GACATGACTGAGCAACTTTTACC
0.194
 
F1
BMS1787
ACCACAGGGGTCTCTTTGC
AAGGAGAGCAGGTACAGAGGC
0.266
 
 
BMS1857
TAATTGATCACAAAGAGGAGCC
GATCCCAGAGAATCACTCACC
0.426
 
 
BMS1948
AACACAGGGAAGTGTGTTTTTAA
GACAGTTTGTGGTGTGGAGAC
0.213
 
 
BMS2149
TGATGTAGAACCAGCCTGTCC
AACAAATGTGCCCTCCACTC
0.172
 
F1
BMS764
TTTTCCCAGATTGGCTTGTC
AGCCGGACACAACTGAGTG
0.287
 
F2
BY1505
GGGAAACCACAAACTTGA
CTGGACATGAATGAGTGACT
0.183
 
 
DIK94
GGAGGACCTGATAGTAACTG
TCAGCGGTGGAAGAATCTTC
0.226
 
F2
IDVGA7
GGGTGGGCTTCATTTCTATG
CAGCCACTGTCTCCTCCCAC
0.255
 
F1
ILSTS015
GTTTCCTAGAGTCTTCAGCG
GAATGTGTCATCAACATATCC
0.34
 
 
ILSTS019
AAGGGACCTCATGTAGAAGC
ACTTTTGGACCCTGTAGTGC
0.181
 
F1
ILSTS57
GGAACTGTTCTAAGAAGTGG
TGCTGTTCATTCTATGTGGG
0.341
 
F1
ILSTS089
AATTCCGTGGACTGAGGAGC
AAGGAACTTTCAACCTGAGG
0.255
 
 
ILSTS081
AGTCAGACAACGACTGTGCG
TTTCGAACAGGCTTTTGGGG
0.25
 
 
INRA143
ATCTGTGGGGTCACAAAGAG
AACACGGTCTCAATCTCAGTG
0.447
 
 
INRA175
AGCTTAGCAGAAAAGAGGGC
AAATTGAAAAATAAAAAAGCAGCA
0.234
 
 
INRA211
TTACAGGTGCAGCTCAGATGCTG
CCTACTGTTTAGCACAGGGAACTC
0.213
 
 
OCAM*
CCTGACTATAATGTACAGATCCCTC
GCAGAATGACTAGGAAGGATGGCA
0.22
opioid binding protein
 
OarHH22
CAACAGGACCTTGAAAACCACACC
CTCAGTTTAATTCCATAGACCAACAGG
0.228
 
 
RM179
TAGTGACTCAAATATAGAGCATGA
ATTGTCACATGTAACAAACCTTGA
0.255
 
 
RM040
TGGAGGACTACAATCCATGAGG
TAAGTGCAGTAAGATGCCATGG
0.277
 
 
RM044
AAAGTGTTGGACATGACTGAAT
TTAACAATTAGCAACAGGAATAGAG
0.266
 
 
RME33
TTAGAGGCACCACCTAACGG
GCTTCTCAGTTGTTCTGCCC
0.226
 
F1
TGLA414
AACTTTATAGGGCAAATTTAAACTA
GTACAAAATCAATCTGTCAGTTCT
0.245
 
 
TGLA86
CCCAGTTTGACAGGTGC
CAGACAGCAAGCATCTGC
0.436
 
 
URB011
ATCGATACCGTCGGCTCCAGAAA
GACGGTTAGAGCAGGAAGGGACT
0.272
 
Not included in map
 
BL1100
ACATGGAGCAGAGGCAGC
AGTACAAGCAGGGGTGCG
0.106
 

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© Roslin Institute 2002

Dr John Williams
0131 527 4200