COMRAD - comparative radiation hybrid mapping
 
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Roslin Institute

 

Markers

BTA 21

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
 
AFZ
TTGGACGACAAAACTCACGG
GTGGCTGGACTGGTCTGGTT
0.326
 
F1
AGLA233
TGCAAACATCCACGTAGCATAAATA
GCATGAACAGCCAATAGTGTCATC
0.228
 
F1
BM103
CTAGCTGCTGGCTACTTGGG
GGCTGCTCTGGGCTATTG
0.226
 
 
BM3413
TCCCTGGTAACCAATGAATTC
CAATGGATTTGACCCTCCC
0.255
 
 
BM8115
AATCAACATCCAGATTTCTTTTTG
CCACCCCAAAGACCTTTCTA
0.344
 
 
BM846
GACCACTGGACCACCAGG
CTGGTAAAAAGCAATGATGCC
0.181
 
 
BMC4228
CAGAGGGATTGTTCTGACTTCA
AGCAGCACTAAGGTTCCAGC
0.258
 
F1
BMS1117
TGTGTGCTCTCTCACACATGC
AACCAAAGCAGGGATCAGG
0.275
 
F1
BMS1494
TCTGGAGCTTGCAAAAGACC
AATGGATGACTCCTGGATGG
0.233
 
 
BMS2382
AGCACGGAGTCGTTGTCTG
CCATCTGGACAGAACGTTACC
0.308
 
 
BMS2557
TTGCCTCATGGAACAATGTG
AAGAGTCGGACACAACTGAGC
0.237
 
 
BMS2815
TGATATTCAAACTCAATGAACCC
CTTGCATATGCTCATCATTATCA
0.227
 
F3
BMS670
ACTGCCATTCTGGTTTCTGC
TGAGCAACTAAACAACGACAGC
0.301
 
F2
BMS868
TCATCCAACCATCTCATCCT
ACATGGAAACGAACCTACATTC
0.194
 
F1
BP33
AGGCCTCTGAATTCCTCTCC
AACCAGCAGTCTTGCTCTCTC
0.247
 
 
CSSM018
ATTCCCTCTAGAAAAGCAGGCTCC
CTCGTGGTGTAGAGAAGACGCCTT
0.287
 
F2
DIK64
CATCATTCTAATGGTAAGGAG
AAAGGCCACTTATGAATCCAT
0.202
 
 
ETH131
GTGGACTATAGACCATAAGGTC
GCTGTGATGGTCTACGAATGA
0.213
 
F1
HAUT28
GCTTGTTCCTATCACCCATTTA
GAAGGCTTGGAAAATGTAATC
0.242
 
F1
HEL5
GCAGGATCACTTGTTAGGGA
AGACGTTAGTGTACATTAAC
0.245
 
 
IDVGA39
ACGGTGGGAACATCTTGTCACTA
CCAGTATTCTTCCTGCGAAAAATC
0.234
 
F1
IDVGA45
GTGGTGGCAAAGAGTCAGA
AACAGCCCTGATTTCCATA
0.223
 
 
ILSTS016
TACTGTATAGGGGGTGCACG
AATCTCTTTCCAACTCTCCC
0.17
 
F1
ILSTS054
GAGGATCTTGATTTTGATGTCC
AGGGCCACTATGGTACTTCC
0.202
 
F2
ILSTS092
GAGAAACTTTGGGCTGCTGC
ATGGATTGCTTCTGTGGACC
0.191
 
 
ILSTS095
GAAAGATGTTGCTAGTGGGG
ATTCTCCTGTGAACCTCTCC
0.266
 
 
ILSTS103
CCAGTCTGCCAAAATCTATCG
TATCAGGCGTAGTAAACAGC
0.234
 
 
ILSTS52
CTGTCCTTTAAGAACAAACC
TGCAACTTAGGCTATTGACG
0.287
 
F1
INRA060
TTCCATATAGCATTTAGAATCAGC
AGACACTCCCAAATAAAATCCC
0.176
 
F1
INRA103
TTGTCCAGCCCAGCATTTAGC
GGAGAAGACTTATGGGAGC
0.25
 
 
RM151
CCCAGAGGTGACAACATTTCCAG
GATCCACCAAAAACCAGCTGGA
0.245
 
F3
TGLA122
CCCTCCTCCAGGTAAATCAGC
AATCACATGGCAAATAAGTACATAC
0.207
 
F3
TGLA337
TTTGTTAAGGATAGTAGGCTACT
GCTCTTCCCTTGGTTTCCTTG
0.191
 
 
URB22
GCACTGAATGTTCCCTGTACTA
TAGGTGGTAATGAATCTCCTGC
0.204
 
 
UWCA4
CAGCTTGAAATGAGTATGTCACC
CAACAAGAAAGCAGAGACTCC
0.266
 
Not included in map
 
BMC5221
AGCAAGGAGAACAGGCATTC
CTTCTTTGGCAGCACAGTTTC
0.194
 

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© Roslin Institute 2002

Dr John Williams
0131 527 4200