COMRAD - comparative radiation hybrid mapping
 
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Roslin Institute

 

Markers

BTA 18

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
 
6359
available on request
 
0.154
 
 
5COR
GATCTGAGAACAGCAGGG
CCCAGCAGCTTTCAACCT
0.213
 
 
9.5COR1
GACACAACTGAGTGACTAACTT
CCATTTCCTCGCAAACTTACC
0.202
 
F2
9.5COR3
GATCACTTAGTCAAACAC
AGACCTTGGGTAAGTGAG
0.223
 
F1
AF3(L6023)
TAATACCTTCAGGGTCCATCC
GAAACATCTAATGTCCATCATGAA
0.266
 
F2
APOE1*
CACTCTCTGGTTTCTCTTGC
CCATGGATAGAGGAGTCTGG
0.191
apolipoprotein E
 
BM2078
CCCAAAAGAAGCCAGGAAG
TCAGAGTTTGGGGTCCTCAG
0.191
 
 
BM6507
ACTTAGCACAATGCCCTCTAGG
ATGTTATTCCATCAGGAGGAGC
0.223
 
 
BMS1322
TGATGCTGATTGATTTTGTGTG
TATCTTTGCTCACTCTTTCCCC
0.266
 
 
BMS1355
TAAAACCCCAAAAAGAACCC
ATATTTGCGACATTGGATGAA
0.202
 
F1
BMS14
CAGCCGGTTGGAAATGAC
GGCAAAACCAAATTAACCTCC
0.255
 
F1
BMS2213
ATGGGCAGCTTAGGGATTG
CTTCAAGAGCCTTCAGTGGG
0.277
 
 
BMS2559
ACCTGGGAGAGGACAATGTG
CTCCAACATCGGTCCCAG
0.266
 
F2
BMS2785
ACAAACCTGTGCGCCTTG
GGCAATCAGTCGGACACAC
0.277
 
 
BMS3004
GGACAGAGGAGCCTGGTTG
AGTTGCGTTGTTCATCATTCC
0.245
 
F1
CDH3*
CCCATACTTCAAGGTGAACAGC
CCTGCAAGGAGCCCTGGATG
0.266
cadherin 3, P-cadherin
F1
CYBA*
GGACAGAAGTACCTGACC
GAGGTGCAAGAAGGCCCG
0.33
cytochrome b-245, alpha polypeptide
 
DIK67
ACAGGTGATGCATGGGGTGG
CCTATTTCCTAGTCACAGAGAC
0.287
 
F2
ETLIN*
CCGGCCAAGTGTGAGCTTG
GGCTATTGCTGGTCACAGTC
0.266
 
 
HAUT14
TGACCTTCACTCATGTTATTAA
CCAGGGAAGATGAAGTGACC
0.404
 
F2
IDVGA55
GTGACTGTATTTGTGAACACCTA
TCTAAAACGGAGGCAGAGATG
0.16
 
F2
ILSTS002
TCTATACACATGTGCTGTGC
CTTAGGGGTGAAGTGACACG
0.213
 
 
INRA185
TTACTGGGGAGACATACCAAGC
CCCACACTAGGGAACCCC
0.298
 
F2
KSCG
GTCACCTGTCTCAGTGCTTTG
GGTCACCGGCTACAGGACAG
0.138
 
F1
MC1R*
CAAGAACCGCAACCTGCACT
GCCTGGGTGGCCAGGACA
0.245
melanocortin 1 receptor
F1
MT2A*
GCAGGACACTGACCGCACTTC
TGTGACTTCTGTGGGCTCAGT
0.309
metallothionein 2 A
 
RYR117
CTGGACGTGCTGTGTTCC
GATGAGGTTTGTCTGCAGC
0.149
 
F2
RM128
GTGAGGAGGAGGGGCGAGGAG
AGGCCTGTGAGAAGATGGTGAG
0.223
 
 
RME1
GTCTCCCTTCAGTGTTCCCA
AGGTTGCTGGCTCCTTTTCT
0.128
 
F1
SYB2*
ACATGGCGGGGGCCAGCGGA
TCTTCCCGTCCCGGGCAGCC
0.181
synaptobrevin 2
F1
TEXAN10
TGTGGCTAGGTTCAAGCTCC
TCTCTTCTGGTGCATCCATTG
0.287
 
 
TGLA131
ATGTTGTCAGAAATGGAAGA
GATCAATGGATAAAGAAGAT
0.223
 
 
TGLA132
CCTTGGTTTCTAATTGTTTATTGCT
ACATGACTTAGCAACTGAACAACAA
0.191
 
 
TGLA357
AAAAGGTTTGGGGTGTATGGG
TCTCCCTCTGTCTCATCTAAG
0.319
 
F1
UWCA28
CACAACCAAGGTCTGGCACAA
GCACCACCATTCACAGGCA
0.234
 
F2
UWCA5
CTTCCCTGTGTTAGGCTATGT
CAAGAGAAGACAAGACTACAGA
0.191
 
Not included in map
 
6369
available on request
 
0.16
 

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© Roslin Institute 2002

Dr John Williams
0131 527 4200