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Markers

BTA 15

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
F2
ABS011
AAAACGGCAATTCAGGGAG
GAAAAACACACCACCTCTTCC
0.266
 
F2
BB1539
CGGCAATAAAGGCTGTCCT
CATCCAGGCAACCCTTGGA
0.223
 
 
BB712
CATGTAGGCATGGGCTTTG
TCTACCATCTGAGCTACCAGGAA
0.283
 
F3
BL1095
TCCCTCTACCATATATTTCCCC
CATTAGCATGGAAAAACCTCTG
0.245
 
 
BM4439
TGTCAAATTATGAAACAAGGAAGC
GAATTCCACGTCACAGAGTCG
0.242
 
 
BM848
TGGTTGGAAGGAAAACTTGG
CCCTCTGCTCCTCAAGACAC
0.255
 
F1
BMS1004
TTAAAAGTCAGAAAGGGAAGCC
CTCGACCTCACATACTCAAAGC
0.213
 
F2
BMS1782
AGCTTTTGTGTGCTTCACATG
TACTCCTTTGCCTTCCTCTCC
0.191
 
 
BMS2076
AGCACCTGTACCATCTGTTCC
TCCATAGGCTCACAAAGAGTTG
0.245
 
F1
BMS2533
TGAAGTAAGTAAGCACACAAGCA
TTGATCATCTTTAGGTCCATCC
0.287
 
 
BMS2684
CCAAGGTCATTGTTGCAGC
TGGGGATTTGCTTCTCAGTC
0.234
 
 
BMS2812
TCCAGGTTAGCTGACATAATCC
ATTGTTCCATTGCATGTTCC
0.202
 
 
BMS429
TACATTAACCCCAAAATTAAATGC
CCCTTGATTTCTCTCATGAGTATT
0.255
 
F3
BMS540
TTTCCCATGTTATTCCATGAA
ACCAGGCTCTTCGTCCTC
0.181
 
 
BMS686
TTCCTTACATCATTCACCACTG
TGGGGATCACAAAGAATCAG
0.245
 
F3
BMS812
TGGACAGGACTGAGTATGCA
AGGTATCCAACTAACACAGCCA
0.149
 
 
BMS820
CCACTACTTGCCTCAGGGAG
ACAGGACTCTCAAGCATCAGC
0.245
 
 
BR3510
GCTGGTGGGTTGTTTACCAC
ACCCCGTGGACTGTAGTCTG
0.277
 
 
BY1520
CACAAATATCCTTGTGTTTTTGGA
CAACAGGAGAAATAAAGAGTG
0.183
 
F1
DIK102
CCTTCTCCCTTTGTCTGTAC
TAGGAAAAACACCAGCAAGAC
0.202
 
 
DIK36
TCTTCCTAGCGTTTCATCAC
TTCCTGGTAAGTCTTTGGGT
0.191
 
 
DRD2*
TGCTCAGTTATCACAGCAGTGGTC
TGCGAAAAGGCGAGAGGAAGAG
0.223
dopamine receptor D2
 
FSHBMS*
TATAGACTTAGTGGCATGATATT
TAGAATAGGTTTTTTTGTAGCAC
0.16
follicule stimulating hormone, beta polypeptide
F2
HBBMS*
GCAGCAATCAGTACAAAAGAGG
GCAACTGGCAAAATTTCATTC
0.202
hemoglobin, beta [beta globin]
 
HEL1
CAACAGCTATTTAACAAGGA
AGGCTACAGTCCATGGGATT
0.202
 
 
IDVGA10
GGCTAAGACCAGCACCTTGAATA
GGGACCTTGAGGAGGAGACAG
0.223
 
 
IDVGA23
TCTGCCCCAACCTGCTGTAG
GCCGCAATCAGGAGTTTGAC
0.245
 
 
IDVGA28
TCACCTTCATCTGCCTTCACTGC
CGTCAAAGTGATGTGCGTATGC
0.16
 
 
IDVGA32
CAGGTGTTGGAGGATGAGAAAGG
CAGTCTATGGCACAGTCTTGGTA
0.17
 
F2
IDVGA60
GTGTGTGTGTGTGTCCAGTG
CCCGAACCTGTGCCCGAAAA
0.16
 
F3
ILSTS27
GGTGTGTTGGTTAAGACTGG
GAATCATAGACCTGACTTCC
0.138
 
F3
ILSTS61
AAATTATAGGGGCCATACGG
TGGCCTACCCTACCATTTCC
0.128
 
F2
INRA224
AGAGGCAGTCCAGTGAAAGG
GCCAGTTTTGTGTACATTATGG
0.245
 
 
INRA46
GAGCTCATGTGTTTACATGG
AGTCTCTGGAACTTCTCCTAC
0.255
 
 
INRA50
ACAGGCTACAGTCCATGGGGTT
TATAGAACAGAAAAATGACTACACG
0.202
 
 
IOBT395
ACAACAGGAAAGCTCTGCCA
ACATGTAGCTGTTGATACAGAT
0.223
 
 
JAB1
CAGCCATTAAGGGCTGGGATTCC
GATTTCTGGAGGAGGCTCACAGCAG
0.234
 
 
JAB8
CACGTCACCCGCTTTCTCTTG
GGTGAGTGTAACACCTGTGTGCG
0.245
 
F1
MGTG13B
GAGTGACTCACTTTCACCTATAATA
CTTAGCATAACGTCCTCTAGATTCA
0.277
 
 
NCAM1MS*
AAGTGACACAACAGCTTCTCC
AAGGAGATTTTATGTTGATCTGCT
0.255
cell adhesion molecule, neural
 
NOR04
ACACAGATGTGGTTTGGGGA
ACTCTCTGCTGTAAACTGTATT
0.213
 
F3
RM4
CAGCAAAATATCAGCAAACCT
CCACCTGGGAAGGCCTTTA
0.277
 
 
X57033
GTAAACACAGTTCCCTGGAGAG
ATGCCAACTTTTCCCATCAC
0.149
 

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© Roslin Institute 2002

Dr John Williams
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