COMRAD - comparative radiation hybrid mapping
 
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Markers

BTA 13

Framework markers
Marker ID
Primer 1
Primer 2
Retention Frequency
Gene Name
 
ABS10
GGAGTGAGACAGGGGTGTGT
TGGCATCCATTCATCCATCT
0.172
 
F1
AF2
CTGAGCGACTGAACTGATAGC
GTTGGAACTGCCAGAGACTAG
0.247
 
 
AGLA232
CCTTTGCAAATACCTCCTGACCAG
AATGGTTCTACATTTGCTAGGTGTC
0.172
 
 
BL1071
AGAAGGACAGAGACCACAGGC
TTGAGGTGAAGAGGTCCACC
0.163
 
 
BL42
CAAGGTCAAGTCCAAATGCC
GCATTTTTGTGTTAATTTCATGC
0.223
 
F3
BM1602
ATTCAGCAATTCTACTCCAGGG
CCAACACCACAGTTCAAAAGC
0.187
 
 
BM4509
TTTATTTCCTGTCTTTGAGGCA
ATCTGTGGTCTTCCTAAACCAA
0.194
 
 
BM720
ACATCTCATTCTTGTGTCATGG
GAAATTGACTTTAGGGTTCCCC
0.181
 
 
BMC1222
CCAATTTTGCAGATAAGAAAACA
CCTGAGTGTTCCTCCTGAGT
0.247
 
 
BMS1145
CAACATTTGGATTGTGATGTCC
TACTGTGTCATGTGCTTTGGC
0.326
 
 
BMS1226
CGGAAGAAGACAAAGAATGAGC
ATGAAATGACACCACCCTCC
0.181
 
 
BMS1231
CATTGGTGTTGGTGTGGTATG
GCACAGATATTTGGTGACAAGG
0.304
 
 
BMS1352
GACTCCAGGTGCAGGAAGAG
TCTGCAAGGAATGACAGTGC
0.287
 
 
BMS1580
GGTACCATGTGCAAGCAGG
CCATCCCATTAGCTGTAAGAGG
0.196
 
F1
BMS1742
GTGTGCCAGCAAGAAAGAGT
TCCACCTGATTTATTTTGGC
0.237
 
 
BMS1784
CTGAAGCCAAGAATCAAGGTG
AGCAGGGTCAGTGCTGATG
0.132
 
 
BMS6548
CGTTTTGGGAGTTTTCTTATGG
TAGCATGCACACATACACGC
0.17
 
F3
BMS813
GGCAAAACTTAACCAAACTGG
CCCCATCTGTGAGAATTAAAAT
0.226
 
 
BMS995
AATTCTTCCAACCTCCAGTGC
ACTTTTCAAGCAGGGCTCAC
0.16
 
 
DIK083
TGTGCATCTTGTCCAGTTTAG
CCACCAATGCTCTCCTCTCA
0.237
 
 
DIK093
TCAGCCTCCACTGTTGGATG
TGATTGAGTGCTTTCTACATGC
0.213
 
 
DIK54
GGATTTTGTTTTAGTGTATTGG
TCAGCACTTCCATTGATTCC
0.194
 
 
ETH7
GTGAGACCCAGCTCCTGCCTGT
CGGAGCAGGGTGTCAGAGCCG
0.181
 
F2
HUJ616
TTCAAACTACACATTGACAGGG
GGACCTTTGGCAATGGAAGG
0.149
 
 
IL2RA*
GCTGATGTGGAGGTTCTTCGTATTC
TCGGTGATGACTGAGGCAAAG
0.309
interleukin 2 receptor
 
ILSTS059
AGTATGGTAAGGCCAAAGGG
CGACTTGTGTTGTTCAAAGC
0.319
 
F2
ILSTS086
CAAGGAGCTTGACTTCCTGG
TGTCTTGTTGTTAGCAACCC
0.191
 
 
JAB3
GCAAGGAGGACCCTGTGCG
CCTAGTATCCAGTCTGTGTCC
0.149
 
 
MILSTS77
GATGAGCAAGACCATACAGC
CTACTCATAATAGCCAAGCC
0.28
 
F3
RM215
AGTCCAACATGAGTGAGCAACT
AACACTTGGGGTTGTAAATTATCT
0.226
 
 
RM327
ATACGCCGCAAGAAATGATA
GCAGTCCTGAGAGTAGTAAACTCTG
0.151
 
 
TGLA23
GAGACACAAGCTTTCAACCACC
TGCCCCAGTTGATTTATTAAAAACA
0.234
 
F1
TGLA6
TAGGCACAATGTCAATAATTTACTC
AATTCTCCATGTTAAGGGTTTACCA
0.181
 
 
URB058
GTAAGGCTCTTTGAGGGTTAGG
GCTTAGAAGTTTCTGTGCTGTC
0.204
 
 
URB07
GACTGCGAACAATATGCGTCCTG
ACGATGGATGGAGTATGGAGGAG
0.191
 
 
UWCA21
CTAAACATTAGACCTGGGGGA
CAAAGGGGTCACAAGGAGTCA
0.245
 
F2
UWCA25
ACAATATGCGTCCTGGAGGAA
TTCTGTGCTGTCTTTTCAGTCTTC
0.191
 
 
VIM*
GCCCAGATTCAAGAACAGCATG
CATTGTTGCGGTTAGCAGCTTC
0.217
vimentin
Not included in map
 
BMS9248
AGGAAGGAACATTTCCAAACTC
TGCATATATTGAAGAATCCTTGTG
0.989
 

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© Roslin Institute 2002

Dr John Williams
0131 527 4200